BINF 6215: Building a bash shell script – Genome Intelligence
DNA SEQUENCING: ILLUMINA WORKFLOW PART-4 (SEQUENCING BIOINFORMATICS)
GitHub - ablab/spades: SPAdes Genome Assembler
Module 18: Assembly Metrics w/ QUAST - YouTube
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de novo assembly of Illumina reads using Spades (Galaxy) - Bioinformatics Documentation
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SPAdes assembler
SPAdes error during assembly, error code -6 (22) · Issue #53 · ablab/spades · GitHub
Spade support for Python 3.8.1 · Issue #80 · javipalanca/spade · GitHub
SPAdes – Center for Algorithmic Biotechnology
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de novo assembly of Illumina reads using Spades (Galaxy) - Bioinformatics Documentation
GitHub - doublevcodes/spade: You can't dig without a spade! - a super-powered networking tool.
SPADES
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Should I consider contigs.fa or scaffolds.fa from SPAdes output for downstream analyses?
Using SPAdes De Novo Assembler - Prjibelski - 2020 - Current Protocols in Bioinformatics - Wiley Online Library
4. Genome assembly — Genomics Tutorial 2020.2.0 documentation
assembly - Problem with SPAdes installation - no bin folder - Bioinformatics Stack Exchange
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Metagenome Assembly – Data Processing and Visualization for Metagenomics
Sam Spade
